COVID-19.рф: ИНФОРМАЦИЯ ПРОТИВ ПАНДЕМИИ

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Reconstructing the evolutionary history of pandemic foot-and-mouth disease viruses: the impact of recombination within the emerging O/ME-SA/Ind-2001 lineage

K. Bachanek-Bankowska, N. Di, J. Wadsworth, V. Mioulet, G. Pezzoni, S. Grazioli, E. Brocchi, S. Kafle, R. Hettiarachchi, P. Kumarawadu, I. Eldaghayes, A. Dayhum, D. Meenowa, S. Sghaier, H. Madani, N. Abouchoaib, B. Hoang, P. Vu, K. Dukpa, R. Gurung, S. Tenzin, U. Wernery, A. Panthumart, K. Seeyo, W. Linchongsubongkoch, A. Relmy, L. Bakkali-Kassimi, A. Scherbakov, D. King, N. Knowles,
2021
https://doi.org/10.1038/s41598-018-32693-8

Foot-and-mouth disease (FMD) is a highly contagious disease of livestock affecting animal production and trade throughout Asia and Africa. Understanding FMD virus (FMDV) global movements and evolution can help to reconstruct the disease spread between endemic regions and predict the risks of incursion into FMD-free countries. Global expansion of a single FMDV lineage is rare but can result in severe economic consequences. Using extensive sequence data we have reconstructed the global space-time transmission history of the O/ME-SA/Ind-2001 lineage (which normally circulates in the Indian sub-continent) providing evidence of at least 15 independent escapes during 2013–2017 that have led to outbreaks in North Africa, the Middle East, Southeast Asia, the Far East and the FMD-free islands of Mauritius. We demonstrated that sequence heterogeneity of this emerging FMDV lineage is accommodated within two co-evolving divergent sublineages and that recombination by exchange of capsid-coding sequences can impact upon the reconstructed evolutionary histories. Thus, we recommend that only sequences encoding the outer capsid proteins should be used for broad-scale phylogeographical reconstruction. These data emphasise the importance of the Indian subcontinent as a source of FMDV that can spread across large distances and illustrates the impact of FMDV genome recombination on FMDV molecular epidemiology. © 2018, The Author(s).

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Документы

Источник

Версии

  • 1. Version of Record от 2021-04-27

Метаданные

Об авторах
  • K. Bachanek-Bankowska
    The Pirbright Institute, Pirbright, Woking, Surrey, United Kingdom
  • N. Di
    Istituto Zooprofilattico Sperimentale della Lombardia e dell’Emilia Romagna, Brescia, Italy
  • J. Wadsworth
    Central Veterinary Laboratory, Department of Livestock Services, Ministry of Agricultural Development, Veterinary Complex Tripureshwor, Kathmandu, Nepal
  • V. Mioulet
    Department of Animal Production and Health, Gatambe, Peradeniya, Sri Lanka
  • G. Pezzoni
    Faculty of Veterinary Medicine, University of Tripoli, Tripoli, Libyan Arab Jamahiriya
  • S. Grazioli
    Livestock and Veterinary Division, Animal Health Laboratory, Reduit, Mauritius
  • E. Brocchi
    Virology department, Institut de la Recherche Vétérinaire de Tunisie, La Rabta, Tunis, Tunisia
  • S. Kafle
    Virology department, Laboratoire Central Vétérinaire d’Alger, Institut National de la Médecine Vétérinaire, Algiers, Algeria
  • R. Hettiarachchi
    Laboratoire Regional d’Analyses et de Recherches de Casablanca, Casablanca, Morocco
  • P. Kumarawadu
    Regional Animal Health Office No.6, Department of Animal Health, Ministry of Agriculture and Rural Development, Ho Chi Minh City, Viet Nam
  • I. Eldaghayes
    Department of Livestock, National Centre for Animal Health, Thimphu, Bhutan
  • A. Dayhum
    Central Veterinary Research Laboratory, Dubai, United Arab Emirates
  • D. Meenowa
    Regional Reference Laboratory for Foot-and-Mouth Disease in South-East Asia, Department of Livestock Development, Pakchong, Thailand
  • S. Sghaier
    Laboratoire de santé animale, UMR Virologie, INRA, Ecole Nationale Vétérinaire d’Alfort, ANSES, Université Paris-Est, Maisons-Alfort Cedex, France
  • H. Madani
    Federal Governmental Budgetary Institution “Federal Centre for Animal Health” (FGBI “ARRIAH”), Yur’evets, Vladimir, Russian Federation
  • N. Abouchoaib
    School of Animal an Veterinary Sciences, The University of Adelaide, Roseworthy, SA, Australia
  • B. Hoang
  • P. Vu
  • K. Dukpa
  • R. Gurung
  • S. Tenzin
  • U. Wernery
  • A. Panthumart
  • K. Seeyo
  • W. Linchongsubongkoch
  • A. Relmy
  • L. Bakkali-Kassimi
  • A. Scherbakov
  • D. King
  • N. Knowles
Название журнала
  • Scientific Reports
Том
  • 8
Выпуск
  • 1
Страницы
  • -
Ключевые слова
  • capsid protein; VP1 protein, Foot-and-mouth disease virus; Africa; animal; Asia; foot and mouth disease; Foot and mouth disease virus; genetic recombination; genetics; Mauritius; molecular epidemiology; molecular evolution; pandemic; phylogeography; virology; virus genome; Africa, Northern; Animals; Asia; Capsid Proteins; Evolution, Molecular; Foot-and-Mouth Disease; Foot-and-Mouth Disease Virus; Genome, Viral; Mauritius; Molecular Epidemiology; Pandemics; Phylogeography; Recombination, Genetic
Издатель
  • Nature Publishing Group
Тип документа
  • journal article
Тип лицензии Creative Commons
  • CC
Правовой статус документа
  • Свободная лицензия
Источник
  • scopus
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