Статья

THE VARIATION OF GENOME SITES ASSOCIATED WITH SEVERE COVID-19 ACROSS POPULATIONS: THE WORLDWIDE AND NATIONAL PATTERNS

O. Balanovsky, Petrushenko, K. Mirzaev, S. Abdullaev, G. I, D. Chernevskiy, A. Agdzhoyan, E. Balanovska, A. K, D. Sychev,
2020

SUMMARY Background The knowledge of clinically relevant markers distribution might become a useful tool in COVID-19 therapy using personalized approach in the lack of unified recommendations for COVID-19 patients management during pandemic. We aimed to identify the frequencies and distribution patterns of rs11385942 and rs657152 polymorphic markers, associated with severe COVID-19, among populations of the world, as well at the national level within Russia. The study was also dedicated to reveal whether population frequencies of both polymorphic markers are associated with COVID-19 cases, recovery and death rates. Methods We genotyped 1883 samples from 91 ethnic populations from Russia and neighboring countries by rs11385942 and rs657152 markers. Local populations which were geographically close and genetically similar were pooled into 28 larger groups. In the similar way we compiled a dataset on the other regions of the globe using genotypes extracted or imputed from the available datasets (32 populations worldwide). The differences in alleles frequencies between groups were estimated and the frequency distribution geographic maps have been constructed. We run the correlation analysis of both markers frequencies in various populations with the COVID-19 epidemiological data on the same populations. Findings The cartographic analysis revealed that distribution of rs11385942 follows the West Eurasian pattern: it is frequent in Europeans, West Asians, and particularly in South Asians but rare or absent in all other parts of the globe. Notably, there is no abrupt changes in frequency across Eurasia but the clinal variation instead. The distribution of rs657152 is more homogeneous. Higher population frequencies of both risk alleles correlated positively with the death rate. For the rs11385942 we can state the tendency only (r=0,13, p=0.65), while for rs657152 the correlation was significantly high (r=0,59, p=0,02). These reasonable correlations were obtained on the Russian dataset, but not on the world dataset. Interpretation Using epidemiological statistics on Russia and neighboring countries we revealed the evident correlation of the risk alleles frequencies with the death rate from COVID-19. The lack of such correlations at the world level should be attributed to the differences in the ways epidemiological data have been counted in different countries. So that, we believe that genetic differences between populations make small but real contribution into the heterogeneity of the pandemic worldwide. New studies on the correlations between COVID-19 recovery/mortality rates and population’s gene pool are urgently needed.

Цитирование

Похожие публикации

Источник

Версии

  • 1. Version of Record от 2020-11-24

Метаданные

Об авторах
  • O. Balanovsky
    Vavilov Institute of General Genetics
  • Petrushenko
    Moscow Institute of Physics and Technology
  • K. Mirzaev
    Russian Medical Academy of Continuous Professional Education
  • S. Abdullaev
    Russian Medical Academy of Continuous Professional Education
  • G. I
    Moscow Institute of Physics and Technology
  • D. Chernevskiy
    Research Centre for Medical Genetics
  • A. Agdzhoyan
    Vavilov Institute of General Genetics
  • E. Balanovska
    Research Centre for Medical Genetics
  • A. K
    Russian Medical Academy of Continuous Professional Education
  • D. Sychev
    Russian Medical Academy of Continuous Professional Education
Предметная рубрика
  • COVID-19
Тип документа
  • other
Тип лицензии Creative Commons
  • CC BY-NC-ND
Правовой статус документа
  • Свободная лицензия
Источник
  • lens